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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912941.1_cds_XP_016463017.1_56181
CDS Infomation

[gene=LOC107786095] [db_xref=GeneID:107786095] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1] [protein_id=XP_016463017.1] [location=complement(join(41749..41997,42723..43044,43418..43794))] [gbkey=CDS]
Sequence

ATGGATTCTCTAACTGTTTCCCACAAACTTCCCATAATTGATTTCACAAAGGAGAACTTG
GAACCAGGCACAAATTCATGGTCCAAGGTATGTAAAGAAGCTGTTTGTGCACTTGAAGAG
TATGGTTGTTTTGTAGCATTGTCTGATAAAATTTCATTGAAGATACATAATGAAGTTTTT
GGAGCACTAGAGAAGGTATTTGATCTTCCCATTCAGACAAAAATCCAGAATAAATCTACC
AAACCTTTGTATGGTTATGTTGGCCAAATCCCATTTATTCCTCTCTATGAGAGCATGGGC
ATTGATAATGCTAATACACTTGAAGGAATCCAAAATTTCACCAATTTCATGTGGTCTAGT
GGAAACAATGCTTTCAGTCAAGCTTTGCTAGCATACTCGAAAGCAGCAGCAGAACTGGAA
GAAATGGTGGTGAGAATGGTATTTGAGAGCTATGGTGTAGAGAAGAACTATGAATCTCAC
ATCAAATCAGTGAATTATCTTGCTAGGGTTATGAAATATAAAGAAGCCCAATTAGAAGAA
CCAAAACTGGGATTTGTTGCTCATACAGACAAGAGCTTCATGTCTACCATTCATCAGAAT
CAAGTTAATGGTTTGGAGATCAAAGGGAAAGATGGTCAGTGGTTTGGAGTTGAGCTTTCC
CCTTCCTCCATCGTGGTCATGGCTGGCGATGCAATCATGGCATGGAGCAATAACAGGATA
AAATCTCCGCATCATAGAGTGATGATGGAAGGGAAGGGAGAAAGATATTCCATTGCCCAA
TTTTCTTTCATGGAAGATACAGTAATGGTTGAAACACCAAAAGAGTTTGTTGATGAAGAG
CACCCCTTAAAGTTCAAACCATTCAACCATCTTGATTATCTTCATTTCTTTAGCAAAGAG
GAAAACAGAAGGCTTGAATGTGCTCTCAAAACCTACTGTGGTGTTTGA

Peptide Sequence

PEP ID

XP_016463017.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Nicotiana tabacum]
Sequence

MDSLTVSHKLPIIDFTKENLEPGTNSWSKVCKEAVCALEEYGCFVALSDKISLKIHNEVF
GALEKVFDLPIQTKIQNKSTKPLYGYVGQIPFIPLYESMGIDNANTLEGIQNFTNFMWSS
GNNAFSQALLAYSKAAAELEEMVVRMVFESYGVEKNYESHIKSVNYLARVMKYKEAQLEE
PKLGFVAHTDKSFMSTIHQNQVNGLEIKGKDGQWFGVELSPSSIVVMAGDAIMAWSNNRI
KSPHHRVMMEGKGERYSIAQFSFMEDTVMVETPKEFVDEEHPLKFKPFNHLDYLHFFSKE
ENRRLECALKTYCGV

Transcript Sequence

Gene sequence data has not been registered.